C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acid-sensing (proton-gated) ion channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359872 ASIC2-003 ENSG00000108684 9606 - 17:33013087-34157294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000359872
Transcript ID Brain
ENST00000359872 1.757±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074A CIL_00074A_0001 CGP 17:32970376-34174964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005272 IEA sodium channel activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006814 IEA sodium ion transport
GO:0007268 TAS synaptic transmission
GO:0007417 TAS central nervous system development
GO:0007422 TAS peripheral nervous system development
GO:0010468 IMP regulation of gene expression
GO:0015280 IEA ligand-gated sodium channel activity
GO:0015672 TAS monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030193 IMP regulation of blood coagulation
GO:0034220 TAS ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0050915 IMP sensory perception of sour taste
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066197 Asic2-002 protein_coding Mus_musculus 0 2998
ENSMUST00000021045 Asic2-001 protein_coding Mus_musculus 0 1886
ENSDART00000105541 asic1a-201 protein_coding Danio_rerio 0 279
ENSDART00000004588 asic1a-001 protein_coding Danio_rerio 0 279

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