C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acid-sensing (proton-gated) ion channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066197 Asic2-002 ENSMUSG00000020704 10090 - 11:80880169-81968457 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMusclePlacentaTestisENSMUST00000066197
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000066197 0.471±0.21 2.551±0.77 0.112±0.05 0.216±0.02 0.020±0.00 0.133±0.02 0.019±0.02 0.050±0.00 0.078±0.05 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074A CIL_00074A_0002 CGP 11:80858365-81968457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003026 IMP regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback
GO:0005216 IDA ion channel activity
GO:0005261 IDA cation channel activity
GO:0005515 IPI protein binding
GO:0005887 IDA integral component of plasma membrane
GO:0006812 IDA cation transport
GO:0006814 IDA sodium ion transport
GO:0007602 IMP phototransduction
GO:0007605 IMP sensory perception of sound
GO:0009612 IMP response to mechanical stimulus
GO:0010447 IDA response to acidic pH
GO:0015280 IDA ligand-gated sodium channel activity
GO:0016021 IDA integral component of membrane
GO:0019229 IMP regulation of vasoconstriction
GO:0022839 IDA ion gated channel activity
GO:0034220 IDA ion transmembrane transport
GO:0034765 IMP regulation of ion transmembrane transport
GO:0035418 IMP protein localization to synapse
GO:0035725 IEA sodium ion transmembrane transport
GO:0042391 IMP regulation of membrane potential
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0043066 IMP negative regulation of apoptotic process
GO:0043197 IDA dendritic spine
GO:0045202 IDA synapse
GO:0050974 IMP detection of mechanical stimulus involved in sensory perception
GO:0051965 IMP positive regulation of synapse assembly
GO:0098655 IDA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225823 ASIC2-001 protein_coding Homo_sapiens 0 1869
ENST00000359872 ASIC2-003 protein_coding Homo_sapiens 0 2998
ENST00000448983 ASIC2-002 processed_transcript Homo_sapiens 0 972
ENST00000579816 ASIC2-004 processed_transcript Homo_sapiens 0 219

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