C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00074A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141316-ENSG00000108684 CGP 9606 17:32970376-34174964
GeneTranscriptPositionBiotype
ENSG00000108684 (ASIC2)
acid-sensing (proton-gated) ion channel 2 		ENST00000225823 (ASIC2-001) 33013087-33292988 protein_coding
ENST00000359872 (ASIC2-003) 33013087-34157294 protein_coding
ENST00000448983 (ASIC2-002) 33023865-33291441 processed_transcript
ENST00000579816 (ASIC2-004) 33111941-33291107 processed_transcript
ENST00000583395 (ASIC2-005) 34157181-34174964 processed_transcript
ENSG00000141316 (SPACA3)
sperm acrosome associated 3 		ENST00000269053 (SPACA3-001) 32991869-32997877 protein_coding
ENST00000394637 (SPACA3-004) 32992851-32997877 processed_transcript
ENST00000394638 (SPACA3-003) 32991869-32997877 protein_coding
ENST00000485015 (SPACA3-002) 32991889-32995717 processed_transcript
ENST00000580599 (SPACA3-005) 32970376-32997877 protein_coding
ENSG00000226049 (TLK2P1)
tousled-like kinase 2 pseudogene 1 		ENST00000530992 (TLK2P1-001) 34036681-34039872 processed_pseudogene
ENSG00000252370 (RNA5SP438)
RNA, 5S ribosomal pseudogene 438 		ENST00000516561 (RNA5SP438-201) 34120056-34120167 rRNA
ENSG00000261156 (RP11-215E13.1)
 ENST00000566930 (RP11-215E13.1-001) 34169372-34183632 lincRNA
ENST00000580792 (RP11-215E13.1-002) 34169372-34195937 lincRNA
ENST00000584724 (RP11-215E13.1-003) 34169372-34182845 lincRNA
ENSG00000263485 (CTC-304I17.4)
 ENST00000580658 (CTC-304I17.4-001) 34080882-34082224 sense_intronic
ENSG00000263571 (CTC-304I17.5)
 ENST00000583224 (CTC-304I17.5-001) 34161737-34164251 lincRNA
ENSG00000264598 (RP1-29G21.1)
 ENST00000578040 (RP1-29G21.1-001) 33052107-33052867 sense_intronic
ENSG00000264643 (RP11-118G23.2)
 ENST00000577546 (RP11-118G23.2-001) 33680577-33680883 lincRNA
ENSG00000264791 (CTC-304I17.2)
 ENST00000577709 (CTC-304I17.2-001) 34142947-34147047 antisense
ENSG00000265115 (RP11-31I22.2)
 ENST00000584863 (RP11-31I22.2-001) 33627027-33635057 antisense
ENSG00000265125 (RP11-31I22.3)
 ENST00000578602 (RP11-31I22.3-003) 33569157-33572345 antisense
ENST00000579896 (RP11-31I22.3-002) 33565764-33581453 antisense
ENST00000579975 (RP11-31I22.3-001) 33580076-33624122 antisense
ENSG00000265356 (RP11-17M24.1)
 ENST00000584758 (RP11-17M24.1-001) 33931132-33936206 sense_intronic
ENSG00000265544 (AA06)
uncharacterized LOC100506677 		ENST00000579745 (AA06-001) 33529787-33533760 sense_intronic
ENSG00000265689 (RP11-118G23.1)
 ENST00000577584 (RP11-118G23.1-001) 33688803-33689174 lincRNA
ENSG00000265697 (RP11-31I22.4)
 ENST00000585093 (RP11-31I22.4-001) 33534110-33541339 antisense
ENSG00000265775 (CTC-304I17.3)
 ENST00000581727 (CTC-304I17.3-001) 34118347-34118882 sense_intronic
ENSG00000279668 (CTC-304I17.1)
 ENST00000624260 (CTC-304I17.1-001) 34069317-34071251 TEC
ENSG00000279674 (RP11-1086I4.2)
 ENST00000624332 (RP11-1086I4.2-001) 34000789-34006772 TEC
ENSG00000280349 (RP11-40A13.2)
 ENST00000624540 (RP11-40A13.2-001) 33099969-33100319 TEC
CIL_00074A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053184-ENSMUSG00000020704 CGP 10090 11:80858365-81968457
GeneTranscriptPositionBiotype
ENSMUSG00000020703 (5530401A14Rik)
RIKEN cDNA 5530401A14 gene 		ENSMUST00000021044 (5530401A14Rik-001) 81860679-81894582 protein_coding
ENSMUST00000126433 (5530401A14Rik-002) 81860673-81866416 processed_transcript
ENSMUSG00000020704 (Asic2)
acid-sensing (proton-gated) ion channel 2 		ENSMUST00000021045 (Asic2-001) 80880169-81153321 protein_coding
ENSMUST00000066197 (Asic2-002) 80880169-81968457 protein_coding
ENSMUSG00000053184 (Spaca3)
sperm acrosome associated 3 		ENSMUST00000103222 (Spaca3-002) 80858372-80867814 protein_coding
ENSMUST00000103223 (Spaca3-001) 80858365-80867810 protein_coding
ENSMUSG00000080980 (1700071K01Rik)
RIKEN cDNA 1700071K01 gene 		ENSMUST00000117522 (1700071K01Rik-001) 81572655-81573473 processed_pseudogene
ENSMUSG00000082027 (Gm11416)
predicted gene 11416 		ENSMUST00000119111 (Gm11416-001) 81046794-81048771 processed_pseudogene
ENSMUSG00000085130 (Gm11417)
predicted gene 11417 		ENSMUST00000150536 (Gm11417-001) 81072403-81083358 antisense
ENSMUSG00000086971 (4930527B05Rik)
RIKEN cDNA 4930527B05 gene 		ENSMUST00000141593 (4930527B05Rik-001) 81385013-81402491 antisense
ENSMUSG00000087534 (Gm11418)
predicted gene 11418 		ENSMUST00000156193 (Gm11418-001) 81587361-81593478 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074A_0001ENSG00000108684ENST00000225823ENST00000359872ENST00000448983ENST00000579816ENST00000583395ENSG00000141316ENST00000269053ENST00000394637ENST00000394638ENST00000485015ENST00000580599ENSG00000226049ENST00000530992ENSG00000252370ENST00000516561ENSG00000261156ENST00000566930ENST00000580792ENST00000584724ENSG00000263485ENST00000580658ENSG00000263571ENST00000583224ENSG00000264598ENST00000578040ENSG00000264643ENST00000577546ENSG00000264791ENST00000577709ENSG00000265115ENST00000584863ENSG00000265125ENST00000578602ENST00000579896ENST00000579975ENSG00000265356ENST00000584758ENSG00000265544ENST00000579745ENSG00000265689ENST00000577584ENSG00000265697ENST00000585093ENSG00000265775ENST00000581727ENSG00000279668ENST00000624260ENSG00000279674ENST00000624332ENSG00000280349ENST00000624540CIL_00074A_0002ENSMUSG00000020703ENSMUST00000021044ENSMUST00000126433ENSMUSG00000020704ENSMUST00000021045ENSMUST00000066197ENSMUSG00000053184ENSMUST00000103222ENSMUST00000103223ENSMUSG00000080980ENSMUST00000117522ENSMUSG00000082027ENSMUST00000119111ENSMUSG00000085130ENSMUST00000150536ENSMUSG00000086971ENSMUST00000141593ENSMUSG00000087534ENSMUST00000156193
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00074A_0001ENSG00000108684ENST00000225823ENST00000359872ENST00000448983ENST00000579816ENSG00000141316ENST00000269053ENST00000394638ENST00000485015ENST00000580599ENSG00000226049ENST00000530992ENSG00000252370ENST00000516561ENSG00000261156ENST00000566930ENST00000580792ENSG00000263485ENST00000580658ENSG00000263571ENST00000583224ENSG00000264598ENST00000578040ENSG00000264643ENST00000577546ENSG00000264791ENST00000577709ENSG00000265115ENST00000584863ENSG00000265125ENST00000578602ENST00000579896ENST00000579975ENSG00000265356ENST00000584758ENSG00000265544ENST00000579745ENSG00000265689ENST00000577584ENSG00000265697ENST00000585093ENSG00000265775ENST00000581727ENSG00000279668ENST00000624260ENSG00000279674ENST00000624332ENSG00000280349ENST00000624540CIL_00074A_0002ENSMUSG00000020703ENSMUST00000021044ENSMUST00000126433ENSMUSG00000020704ENSMUST00000021045ENSMUST00000066197ENSMUSG00000053184ENSMUST00000103222ENSMUST00000103223ENSMUSG00000080980ENSMUST00000117522ENSMUSG00000082027ENSMUST00000119111ENSMUSG00000085130ENSMUST00000150536ENSMUSG00000086971ENSMUST00000141593ENSMUSG00000087534ENSMUST00000156193
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108684 ENST00000225823 N/A 0.007±0.00 0.134±0.00 1.492±0.49 0.073±0.00 0.039±0.01 N/A 0.605±0.00 0.038±0.00 0.027±0.00 N/A 0.085±0.01 0.160±0.08 N/A
ENST00000359872 N/A N/A N/A 1.757±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 0.025±0.00 N/A
ENST00000579816 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A
ENST00000583395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141316 ENST00000269053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.495±22.66
ENST00000394637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394638 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 0.169±0.00 N/A
ENST00000485015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.203±0.00 N/A N/A
ENST00000580599 N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A 0.024±0.00 N/A 0.068±0.00 N/A N/A
ENSG00000226049 ENST00000530992 N/A N/A 0.036±0.00 0.256±0.20 0.007±0.00 N/A 0.016±0.00 0.056±0.00 0.043±0.00 0.041±0.04 N/A 0.072±0.04 N/A 0.115±0.09
ENSG00000252370 ENST00000516561 N/A N/A N/A 0.225±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.582±0.00
ENSG00000261156 ENST00000566930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A 0.572±0.00
ENST00000580792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.248±2.61
ENST00000584724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263485 ENST00000580658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.663±0.01
ENSG00000263571 ENST00000583224 N/A N/A N/A 0.425±0.26 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.02
ENSG00000264598 ENST00000578040 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264643 ENST00000577546 N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264791 ENST00000577709 N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265115 ENST00000584863 0.028±0.00 0.257±0.00 N/A 0.495±0.00 0.319±0.00 0.080±0.00 0.105±0.00 0.143±0.00 0.025±0.00 0.052±0.00 0.222±0.00 0.093±0.00 N/A 0.389±0.13
ENSG00000265125 ENST00000578602 N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.07
ENST00000579896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00
ENST00000579975 0.047±0.00 0.378±0.00 N/A 0.081±0.00 N/A 0.024±0.00 N/A N/A 0.043±0.00 0.094±0.00 N/A 0.178±0.00 N/A 0.342±0.00
ENSG00000265356 ENST00000584758 0.300±0.00 0.659±0.00 N/A 0.178±0.00 0.534±0.00 0.149±0.00 2.010±0.00 0.040±0.00 0.169±0.00 0.106±0.00 2.941±0.00 0.143±0.00 N/A 0.145±0.00
ENSG00000265544 ENST00000579745 N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.18
ENSG00000265689 ENST00000577584 N/A N/A N/A 0.154±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265697 ENST00000585093 N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.06
ENSG00000265775 ENST00000581727 N/A N/A N/A 1.522±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.205±0.07
ENSG00000279668 ENST00000624260 0.026±0.00 0.067±0.00 N/A 0.222±0.04 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A 0.342±0.00
ENSG00000279674 ENST00000624332 N/A N/A N/A 0.268±0.15 N/A 0.066±0.00 N/A N/A 0.037±0.00 0.033±0.00 0.005±0.00 N/A N/A 0.048±0.05
ENSG00000280349 ENST00000624540 N/A N/A 0.553±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.270±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020703 ENSMUST00000021044 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.080±0.04 N/A N/A
ENSMUST00000126433 0.017±0.00 0.061±0.00 0.011±0.01 N/A 0.059±0.02 N/A 0.019±0.01 0.016±0.01 0.008±0.00 N/A N/A 0.060±0.04 0.007±0.00 0.032±0.01
ENSMUSG00000020704 ENSMUST00000021045 4.183±3.36 0.556±0.24 0.465±0.01 5.392±1.62 0.106±0.05 0.498±0.09 N/A 0.406±0.17 0.008±0.00 0.023±0.01 0.058±0.02 6.934±2.73 0.149±0.12 0.094±0.02
ENSMUST00000066197 N/A 0.471±0.21 N/A 2.551±0.77 0.112±0.05 0.216±0.02 0.020±0.00 0.133±0.02 0.019±0.02 N/A 0.050±0.00 N/A 0.078±0.05 0.083±0.00
ENSMUSG00000053184 ENSMUST00000103222 N/A N/A 0.011±0.00 0.043±0.01 0.090±0.03 0.207±0.10 0.101±0.06 0.102±0.11 0.032±0.02 0.183±0.14 0.043±0.00 0.185±0.08 0.106±0.04 198.903±76.72
ENSMUST00000103223 N/A N/A N/A N/A N/A 0.106±0.03 N/A N/A N/A N/A N/A 0.071±0.00 0.006±0.00 N/A
ENSMUSG00000080980 ENSMUST00000117522 N/A N/A N/A 0.086±0.00 0.140±0.00 0.083±0.00 0.045±0.00 0.043±0.00 N/A N/A N/A 0.110±0.00 N/A 12.054±3.11
ENSMUSG00000082027 ENSMUST00000119111 0.055±0.00 N/A 0.028±0.00 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A 0.189±0.05 N/A N/A
ENSMUSG00000085130 ENSMUST00000150536 0.059±0.00 0.164±0.00 0.019±0.00 0.107±0.00 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.331±0.00 0.006±0.00 0.038±0.00
ENSMUSG00000086971 ENSMUST00000141593 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000087534 ENSMUST00000156193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.283±0.00

Loading