C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurocalcin delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119730 Ncald-003 ENSMUSG00000051359 10090 - 15:37366267-37459349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119730 2.895±1.29 6.301±0.50 23.075±2.51 25.763±16.23 1.587±0.50 9.719±1.37 2.034±0.46 7.838±1.05 6.090±3.19 25.696±3.79 0.368±0.14 18.982±5.43 1.896±1.67 0.288±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T4 CIL_0004T4_0003 CGP 15:37233036-37792570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003073 IMP regulation of systemic arterial blood pressure
GO:0005509 IEA calcium ion binding
GO:0019722 IMP calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000004034 hpca-001 protein_coding Danio_rerio 0 364
ENST00000220931 NCALD-003 protein_coding Homo_sapiens 0 1184
ENST00000311028 NCALD-201 protein_coding Homo_sapiens 0 1144
ENST00000338163 RBM39-008 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000340635 PDE4D-001 protein_coding Homo_sapiens 0.0002 53
ENST00000360162 ADD3-003 protein_coding Homo_sapiens 0.000001 60
ENST00000361162 RBM39-001 protein_coding Homo_sapiens 0.0002 53
ENST00000370419 RIMS1-001 retained_intron Homo_sapiens 0.00006 55
ENST00000374038 RBM39-020 protein_coding Homo_sapiens 0.0002 53
ENST00000395923 NCALD-202 protein_coding Homo_sapiens 0 1144
ENST00000397370 RBM39-013 protein_coding Homo_sapiens 0.0002 53
ENST00000403542 RBM39-006 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000412738 RBM39-017 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000429968 RBM39-005 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000433027 RBM39-045 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000436909 PAPD5-001 protein_coding Homo_sapiens 0.0002 53
ENST00000442447 RBM39-016 processed_transcript Homo_sapiens 0.0002 53
ENST00000444878 RBM39-007 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000453310 RBM39-012 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000461849 RBM39-014 retained_intron Homo_sapiens 0.0002 53
ENST00000463004 RBM39-004 retained_intron Homo_sapiens 0.0002 53
ENST00000463098 RBM39-003 processed_transcript Homo_sapiens 0.0002 53
ENST00000491071 RIMS1-010 protein_coding Homo_sapiens 0.00006 55
ENST00000517531 NCALD-012 protein_coding Homo_sapiens 0 488
ENST00000517822 NCALD-017 protein_coding Homo_sapiens 0 514
ENST00000518166 NCALD-010 protein_coding Homo_sapiens 0 531
ENST00000518661 NCALD-013 protein_coding Homo_sapiens 0 372
ENST00000518727 NCALD-015 protein_coding Homo_sapiens 0 553
ENST00000519098 NCALD-029 protein_coding Homo_sapiens 0 420
ENST00000519508 NCALD-007 protein_coding Homo_sapiens 0 1144
ENST00000520346 NCALD-030 protein_coding Homo_sapiens 0 381
ENST00000520425 NCALD-014 protein_coding Homo_sapiens 0 547
ENST00000520690 NCALD-019 protein_coding Homo_sapiens 0 595
ENST00000521371 NCALD-021 processed_transcript Homo_sapiens 0.000000004 66
ENST00000521599 NCALD-001 protein_coding Homo_sapiens 0 1144
ENST00000521957 NCALD-020 processed_transcript Homo_sapiens 0.000000003 66
ENST00000521964 NCALD-011 protein_coding Homo_sapiens 0 425
ENST00000522078 NCALD-008 protein_coding Homo_sapiens 0.000000000000003 86
ENST00000522206 NCALD-009 protein_coding Homo_sapiens 0 257
ENST00000522252 NCALD-023 protein_coding Homo_sapiens 0 514
ENST00000522448 NCALD-031 protein_coding Homo_sapiens 0 603
ENST00000522754 NCALD-006 retained_intron Homo_sapiens 0 590
ENST00000522951 NCALD-002 protein_coding Homo_sapiens 0 754
ENST00000523923 NCALD-016 protein_coding Homo_sapiens 0 401
ENST00000524137 NCALD-027 protein_coding Homo_sapiens 2e-17 94
ENST00000524209 NCALD-028 protein_coding Homo_sapiens 0 490
ENST00000528062 RBM39-015 protein_coding Homo_sapiens 0.0002 53

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