C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 10, non-muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360416 MYH10-002 ENSG00000133026 9606 - 17:8474205-8630761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000360416
Transcript ID Brain Muscle
ENST00000360416 6.237±0.12 0.317±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0000281 IDA mitotic cytokinesis
GO:0001701 IEA in utero embryonic development
GO:0001725 IDA stress fiber
GO:0001764 IEA neuron migration
GO:0001778 IEA plasma membrane repair
GO:0003774 IEA motor activity
GO:0003779 NAS actin binding
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA:IDA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IEA spindle
GO:0005886 IEA plasma membrane
GO:0005938 IDA cell cortex
GO:0006200 IMP ATP catabolic process
GO:0006887 IEA exocytosis
GO:0006930 IEA substrate-dependent cell migration, cell extension
GO:0007097 IEA nuclear migration
GO:0007155 IEA cell adhesion
GO:0007165 IEA signal transduction
GO:0007409 IEA axonogenesis
GO:0007411 TAS axon guidance
GO:0007420 IEA brain development
GO:0007512 IEA adult heart development
GO:0008152 IEA metabolic process
GO:0008283 IEA cell proliferation
GO:0008360 IEA regulation of cell shape
GO:0016459 NAS:IEA myosin complex
GO:0016460 IDA myosin II complex
GO:0021592 IEA fourth ventricle development
GO:0021670 IEA lateral ventricle development
GO:0021678 IEA third ventricle development
GO:0021680 IEA cerebellar Purkinje cell layer development
GO:0030036 IEA actin cytoskeleton organization
GO:0030048 IDA actin filament-based movement
GO:0030239 IEA myofibril assembly
GO:0030424 IEA axon
GO:0030426 IEA growth cone
GO:0030496 IDA midbody
GO:0030898 IDA actin-dependent ATPase activity
GO:0031032 IMP actomyosin structure organization
GO:0031175 IEA neuron projection development
GO:0031594 IEA neuromuscular junction
GO:0032154 IDA cleavage furrow
GO:0042641 IDA actomyosin
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0043531 IDA ADP binding
GO:0050885 IEA neuromuscular process controlling balance
GO:0051015 IEA:IDA actin filament binding
GO:0055003 IEA cardiac myofibril assembly
GO:0055015 IEA ventricular cardiac muscle cell development
GO:0060041 IEA retina development in camera-type eye
GO:0070062 IDA extracellular vesicular exosome
GO:0097513 IDA myosin II filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018887 Myh10-002 protein_coding Mus_musculus 0 8890
ENSMUST00000102611 Myh10-001 protein_coding Mus_musculus 0 6141
ENSMUST00000092984 Myh10-008 protein_coding Mus_musculus 0 6137
ENSDART00000046359 myh10-201 protein_coding Danio_rerio 0 2582
ENSDART00000151114 myh10-001 protein_coding Danio_rerio 0 2582
ENSDART00000150939 myh10-002 protein_coding Danio_rerio 0 2582
ENSMUST00000139059 Myh10-003 processed_transcript Mus_musculus 0 1328
ENSMUST00000155765 Myh10-010 retained_intron Mus_musculus 0 1243
ENSMUST00000108673 Myh10-006 protein_coding Mus_musculus 0 1140
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0 865
ENSMUST00000016771 Myh9-001 protein_coding Mus_musculus 0 715
ENSMUST00000090287 Myh11-201 protein_coding Mus_musculus 0 579
ENSMUST00000124006 Myh10-005 processed_transcript Mus_musculus 0 538
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0 357
ENSMUST00000143032 Myh10-007 processed_transcript Mus_musculus 0 305
ENSDART00000105232 myh9a-202 protein_coding Danio_rerio 0 283
ENSDART00000149823 myh9a-001 protein_coding Danio_rerio 0 283
ENSMUST00000145408 Myh10-004 processed_transcript Mus_musculus 0 206
ENSDART00000149899 myh9a-002 retained_intron Danio_rerio 0.00000002 68

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