C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 11, smooth muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090287 Myh11-201 ENSMUSG00000018830 10090 - 16:14194527-14291408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090287
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090287 28.263±22.50 0.580±0.18 495.377±0.00 2.063±2.76 3.075±1.44 73.638±19.05 4.341±2.29 2.781±1.91 0.333±0.14 13.582±4.88 2.251±0.86 28.587±18.90 10.650±19.95 8.059±6.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MU CIL_0006MU_0002 CGP 16:14163275-14291408
CIL_0002TD CIL_0002TD_0002 CGP 16:14194527-14317375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003774 IMP motor activity
GO:0003779 IEA actin binding
GO:0005524 IEA ATP binding
GO:0005859 IDA muscle myosin complex
GO:0006939 IMP smooth muscle contraction
GO:0008152 IEA metabolic process
GO:0008307 IEA structural constituent of muscle
GO:0016459 IDA myosin complex
GO:0030485 IDA smooth muscle contractile fiber
GO:0048251 IEA elastic fiber assembly
GO:0048739 IEA cardiac muscle fiber development
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041142 myh11a-001 protein_coding Danio_rerio 0 2942
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0 1784
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0 1729
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 1153
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 861
ENST00000216181 MYH9-001 protein_coding Homo_sapiens 0 3147
ENST00000269243 MYH10-001 protein_coding Homo_sapiens 0 1840
ENST00000300036 MYH11-001 protein_coding Homo_sapiens 0 6953
ENST00000360416 MYH10-002 protein_coding Homo_sapiens 0 579
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 0 798
ENST00000379980 MYH10-201 protein_coding Homo_sapiens 0 1578
ENST00000396324 MYH11-006 protein_coding Homo_sapiens 0 6855
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 0 798
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 0 324
ENST00000452625 MYH11-013 protein_coding Homo_sapiens 0 7062
ENST00000475726 MYH9-010 processed_transcript Homo_sapiens 2e-39 167
ENST00000486218 MYH9-011 retained_intron Homo_sapiens 5e-40 169
ENST00000570785 MYH11-011 retained_intron Homo_sapiens 0 1687
ENST00000571275 MYH11-008 retained_intron Homo_sapiens 0 2252
ENST00000574119 MYH11-015 retained_intron Homo_sapiens 0 315
ENST00000576164 MYH11-009 retained_intron Homo_sapiens 0 636
ENST00000576790 MYH11-003 protein_coding Homo_sapiens 0 7160
ENST00000584124 MYH10-010 retained_intron Homo_sapiens 0 226
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 0 798
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 0 798
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 0 791
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 0 475
ENST00000611087 MYH11-201 protein_coding Homo_sapiens 0 7060
ENST00000612165 MYH11-203 protein_coding Homo_sapiens 0 7071
ENST00000614597 MYH11-204 protein_coding Homo_sapiens 0 7060
ENST00000616422 MYH11-205 protein_coding Homo_sapiens 0 7158
ENST00000616439 MYH11-202 protein_coding Homo_sapiens 0 7060
ENST00000618564 MYH11-206 protein_coding Homo_sapiens 0 7060
ENST00000621545 MYH11-207 protein_coding Homo_sapiens 0 6865

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