C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361147 KCNN3-002 ENSG00000143603 9606 - 1:154707426-154859843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLungOvaryENST00000361147
Transcript ID Adrenal Kidney Lung Ovary
ENST00000361147 1.365±0.00 0.095±0.00 0.879±0.09 1.144±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LU CIL_0000LU_0002 CGP 1:154582062-154870280

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IBA:IEA calmodulin binding
GO:0005886 IBA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0015269 IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IBA:IEA small conductance calcium-activated potassium channel activity
GO:0043025 IBA neuronal cell body
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000811 Kcnn3-001 protein_coding Mus_musculus 0 2109
ENSMUST00000124584 Kcnn3-002 retained_intron Mus_musculus 0 883
ENSDART00000088588 kcnn1b-201 protein_coding Danio_rerio 0 752
ENSDART00000132685 kcnn1b-001 protein_coding Danio_rerio 0 752
ENSDART00000142596 kcnn1b-003 protein_coding Danio_rerio 0 693
ENSDART00000141221 KCNN2-001 protein_coding Danio_rerio 0 652

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