C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000LU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000012389-ENSDARG00000019753 CGP 7955 16:25770876-25958945
GeneTranscriptPositionBiotype
ENSDARG00000012389 (adar)
adenosine deaminase, RNA-specific 		ENSDART00000025629 (adar-201) 25775202-25795936 protein_coding
ENSDART00000103213 (adar-202) 25770876-25796559 protein_coding
ENSDART00000130112 (adar-203) 25770876-25796559 protein_coding
ENSDART00000146708 (adar-001) 25770876-25797007 protein_coding
ENSDARG00000019753 (kcnn3)
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 		ENSDART00000103211 (kcnn3-201) 25839334-25958945 protein_coding
ENSDART00000131627 (kcnn3-001) 25838201-25958942 protein_coding
ENSDARG00000080572 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000117093 (5S_rRNA.52-201) 25846524-25846645 rRNA
CIL_0000LU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160710-ENSG00000143603 CGP 9606 1:154582062-154870280
GeneTranscriptPositionBiotype
ENSG00000143603 (KCNN3)
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 		ENST00000271915 (KCNN3-001) 154697455-154870280 protein_coding
ENST00000358505 (KCNN3-003) 154707952-154868319 protein_coding
ENST00000361147 (KCNN3-002) 154707426-154859843 protein_coding
ENST00000515643 (KCNN3-004) 154702729-154708226 processed_transcript
ENST00000618040 (KCNN3-201) 154697474-154870278 protein_coding
ENSG00000160710 (ADAR)
adenosine deaminase, RNA-specific 		ENST00000368471 (ADAR-002) 154582067-154627964 protein_coding
ENST00000368474 (ADAR-001) 154582062-154608206 protein_coding
ENST00000463920 (ADAR-003) 154600177-154627986 retained_intron
ENST00000471068 (ADAR-005) 154602096-154627999 processed_transcript
ENST00000492630 (ADAR-004) 154584634-154585418 retained_intron
ENST00000494866 (ADAR-006) 154602078-154627912 processed_transcript
ENST00000526905 (ADAR-008) 154602199-154608812 processed_transcript
ENST00000529168 (ADAR-007) 154584809-154602626 protein_coding
ENST00000530954 (ADAR-010) 154585647-154588280 retained_intron
ENST00000534279 (ADAR-009) 154585993-154588602 retained_intron
ENSG00000278405 (AL606500.1)
 ENST00000611652 (AL606500.1-201) 154610493-154610586 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LU_0001ENSDARG00000012389ENSDART00000025629ENSDART00000103213ENSDART00000130112ENSDART00000146708ENSDARG00000019753ENSDART00000103211ENSDART00000131627ENSDARG00000080572ENSDART00000117093CIL_0000LU_0002ENSG00000143603ENST00000271915ENST00000358505ENST00000361147ENST00000515643ENST00000618040ENSG00000160710ENST00000368471ENST00000368474ENST00000463920ENST00000471068ENST00000492630ENST00000494866ENST00000526905ENST00000529168ENST00000530954ENST00000534279ENSG00000278405ENST00000611652
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000LU_0001ENSDARG00000012389ENSDART00000025629ENSDART00000103213ENSDART00000146708ENSDARG00000019753ENSDART00000103211ENSDART00000131627ENSDARG00000080572ENSDART00000117093CIL_0000LU_0002ENSG00000143603ENST00000271915ENST00000358505ENST00000361147ENST00000618040ENSG00000160710ENST00000368471ENST00000368474ENST00000529168ENSG00000278405ENST00000611652
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000012389 ENSDART00000025629 N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 N/A N/A N/A N/A N/A
ENSDART00000103213 N/A N/A N/A 3.220±1.50 N/A N/A 5.689±0.00 N/A 0.735±0.00 N/A 0.603±0.00 N/A N/A N/A
ENSDART00000130112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146708 N/A N/A N/A 4.351±1.04 N/A N/A 7.862±5.69 5.385±1.12 N/A N/A 1.128±0.00 N/A N/A N/A
ENSDARG00000019753 ENSDART00000103211 N/A N/A N/A 3.014±0.96 N/A N/A 0.943±1.04 0.159±0.00 N/A N/A 0.185±0.00 N/A N/A N/A
ENSDART00000131627 N/A N/A N/A 5.209±1.50 N/A N/A 0.125±0.00 N/A N/A N/A 0.621±0.00 N/A N/A N/A
ENSDARG00000080572 ENSDART00000117093 N/A N/A N/A 69.346±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143603 ENST00000271915 N/A N/A 0.223±0.00 1.871±0.64 0.271±0.00 0.665±0.06 0.350±0.01 0.587±0.00 0.705±0.69 N/A 1.777±0.82 0.330±0.34 0.012±0.00 0.073±0.01
ENST00000358505 N/A 1.517±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.771±0.00 0.101±0.02 0.808±0.00
ENST00000361147 N/A 1.365±0.00 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.879±0.09 N/A 1.144±0.00 N/A N/A
ENST00000515643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618040 0.062±0.00 0.355±0.00 N/A N/A 0.188±0.00 0.747±0.00 N/A N/A 0.013±0.00 0.373±0.12 N/A 0.144±0.03 0.012±0.00 0.076±0.00
ENSG00000160710 ENST00000368471 7.822±0.00 18.227±0.00 3.014±0.00 14.125±7.64 5.494±0.22 9.022±0.00 2.928±0.00 N/A 5.669±0.00 6.280±1.67 N/A 19.508±14.02 4.721±1.15 11.879±0.00
ENST00000368474 18.024±0.00 N/A 1.501±0.00 5.164±2.78 11.668±0.29 7.557±1.93 5.144±2.75 17.762±1.86 6.502±0.47 11.713±6.50 3.255±0.00 11.152±4.74 8.783±3.22 11.572±0.33
ENST00000463920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529168 N/A N/A 3.383±0.00 N/A N/A N/A 1.015±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000530954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278405 ENST00000611652 N/A N/A N/A N/A 2.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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