C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183143 Dclre1a-002 ENSMUSG00000025077 10090 - 19:56529167-56548147 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryENSMUST00000183143
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary
ENSMUST00000183143 0.486±0.00 0.420±0.02 0.304±0.00 0.348±0.00 0.614±0.00 0.363±0.04 0.508±0.06 0.126±0.00 0.551±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QZ CIL_0001QZ_0003 CGP 19:56461637-56548222
CIL_0001QY CIL_0001QY_0003 CGP 19:56529167-56598846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 ISA nucleus
GO:0006289 IMP nucleotide-excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361384 DCLRE1A-002 protein_coding Homo_sapiens 0 824
ENST00000369305 DCLRE1A-001 protein_coding Homo_sapiens 0 824

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