C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000361762 PCDH7-001 ENSG00000169851 9606 + 4:30720415-30732973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryENST00000361762
Transcript ID Adrenal Breast Colon Kidney Liver Ovary
ENST00000361762 0.714±0.00 0.640±0.42 1.082±0.00 0.194±0.05 0.031±0.00 0.467±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079S CIL_00079S_0001 CGP 4:26857678-31146805
CIL_0002TS CIL_0002TS_0002 CGP 4:30720415-36244509

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068110 Pcdh7-201 protein_coding Mus_musculus 0 5363
ENSMUST00000094783 Pcdh7-202 protein_coding Mus_musculus 0 4942

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