C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366668 COG2-002 ENSG00000135775 9606 + 1:230642567-230693982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000366668
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000366668 1.449±0.00 1.711±0.00 2.283±0.00 1.435±0.00 1.011±0.51 1.839±0.00 1.173±0.00 1.470±0.00 1.927±0.00 0.910±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060Z CIL_00060Z_0001 CGP 1:230314482-230693982
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000610 CIL_000610_0001 CGP 1:230642489-230714297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI protein binding
GO:0005795 IDA Golgi stack
GO:0006486 TAS protein glycosylation
GO:0006886 TAS intracellular protein transport
GO:0006891 IMP intra-Golgi vesicle-mediated transport
GO:0007030 IMP Golgi organization
GO:0008565 IMP protein transporter activity
GO:0009312 TAS oligosaccharide biosynthetic process
GO:0017119 IDA Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034460 Cog2-001 protein_coding Mus_musculus 0 1712
ENSMUST00000108803 Cog2-003 retained_intron Mus_musculus 0 1363

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