C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00060Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177614-ENSG00000135775 CGP 9606 1:230314482-230693982
GeneTranscriptPositionBiotype
ENSG00000135775 (COG2)
component of oligomeric golgi complex 2 		ENST00000366668 (COG2-002) 230642567-230693982 protein_coding
ENST00000366669 (COG2-001) 230642492-230693982 protein_coding
ENST00000468893 (COG2-009) 230642505-230693625 nonsense_mediated_decay
ENST00000473671 (COG2-004) 230642521-230660873 retained_intron
ENST00000478710 (COG2-008) 230689961-230691819 processed_transcript
ENST00000482012 (COG2-006) 230684323-230688528 processed_transcript
ENST00000490900 (COG2-007) 230687990-230690319 processed_transcript
ENST00000494371 (COG2-003) 230642489-230683428 retained_intron
ENST00000534989 (COG2-010) 230642811-230693981 protein_coding
ENSG00000177614 (PGBD5)
piggyBac transposable element derived 5 		ENST00000391860 (PGBD5-001) 230314482-230425729 protein_coding
ENST00000525115 (PGBD5-002) 230323248-230377645 protein_coding
ENST00000530424 (PGBD5-003) 230323542-230336295 processed_transcript
ENSG00000232964 (RP11-543E8.1)
 ENST00000412647 (RP11-543E8.1-001) 230592660-230595583 lincRNA
ENSG00000235817 (RP11-543E8.2)
 ENST00000444423 (RP11-543E8.2-001) 230612009-230612412 processed_pseudogene
CIL_00060Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050751-ENSMUSG00000031979 CGP 10090 8:124369049-124552008
GeneTranscriptPositionBiotype
ENSMUSG00000031979 (Cog2)
component of oligomeric golgi complex 2 		ENSMUST00000034460 (Cog2-001) 124520767-124552008 protein_coding
ENSMUST00000108803 (Cog2-003) 124520805-124545774 retained_intron
ENSMUST00000129977 (Cog2-002) 124535209-124544393 retained_intron
ENSMUST00000176159 (Cog2-004) 124520804-124529931 nonsense_mediated_decay
ENSMUST00000176279 (Cog2-005) 124520819-124529903 nonsense_mediated_decay
ENSMUSG00000050751 (Pgbd5)
piggyBac transposable element derived 5 		ENSMUST00000052580 (Pgbd5-201) 124369049-124433936 protein_coding
ENSMUST00000128312 (Pgbd5-004) 124371869-124375546 processed_transcript
ENSMUST00000136892 (Pgbd5-002) 124370023-124393216 protein_coding
ENSMUST00000140012 (Pgbd5-001) 124369053-124434338 protein_coding
ENSMUST00000140126 (Pgbd5-005) 124371885-124375111 retained_intron
ENSMUST00000172566 (Pgbd5-003) 124369049-124439658 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060Z_0001ENSG00000135775ENST00000366668ENST00000366669ENST00000468893ENST00000473671ENST00000478710ENST00000482012ENST00000490900ENST00000494371ENST00000534989ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000232964ENST00000412647ENSG00000235817ENST00000444423CIL_00060Z_0002ENSMUSG00000031979ENSMUST00000034460ENSMUST00000108803ENSMUST00000129977ENSMUST00000176159ENSMUST00000176279ENSMUSG00000050751ENSMUST00000052580ENSMUST00000128312ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060Z_0001ENSG00000135775ENST00000366668ENST00000366669ENST00000468893ENST00000473671ENST00000478710ENST00000494371ENSG00000177614ENST00000391860ENST00000525115ENST00000530424ENSG00000232964ENST00000412647ENSG00000235817ENST00000444423CIL_00060Z_0002ENSMUSG00000031979ENSMUST00000034460ENSMUST00000108803ENSMUST00000129977ENSMUST00000176159ENSMUSG00000050751ENSMUST00000052580ENSMUST00000136892ENSMUST00000140012ENSMUST00000140126ENSMUST00000172566
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135775 ENST00000366668 1.449±0.00 N/A 1.711±0.00 N/A 2.283±0.00 1.435±0.00 1.011±0.51 1.839±0.00 1.173±0.00 N/A 1.470±0.00 1.927±0.00 0.910±0.00 N/A
ENST00000366669 3.088±0.00 10.536±0.00 N/A 4.663±0.16 2.125±0.52 2.994±0.27 3.655±2.01 10.397±0.00 2.587±0.00 2.083±0.34 9.149±0.00 6.128±2.34 3.928±0.27 7.463±0.62
ENST00000468893 N/A N/A N/A N/A 1.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473671 N/A N/A 3.844±0.00 N/A N/A N/A N/A N/A N/A 3.782±0.00 N/A N/A 6.948±0.00 N/A
ENST00000478710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.295±0.00 5.988±0.00 15.948±0.00
ENST00000482012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494371 N/A N/A N/A 0.492±0.00 N/A N/A 0.211±0.00 N/A N/A 0.612±0.00 N/A 0.522±0.00 N/A N/A
ENST00000534989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177614 ENST00000391860 N/A 0.134±0.00 0.049±0.00 5.252±1.82 0.155±0.00 0.075±0.01 0.299±0.21 0.216±0.00 0.427±0.41 0.119±0.00 0.071±0.03 0.162±0.01 0.314±0.03 0.828±0.20
ENST00000525115 N/A N/A 0.605±0.00 N/A 0.344±0.00 0.134±0.08 1.220±1.02 0.638±0.00 1.807±0.00 0.418±0.00 0.277±0.00 0.590±0.35 0.640±0.15 1.808±0.00
ENST00000530424 N/A N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232964 ENST00000412647 N/A N/A N/A 0.066±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.058±0.00 N/A 0.293±0.00
ENSG00000235817 ENST00000444423 0.054±0.00 0.110±0.00 N/A N/A N/A N/A N/A 0.266±0.00 0.024±0.00 0.073±0.00 0.121±0.00 N/A N/A 0.080±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031979 ENSMUST00000034460 12.135±0.86 8.158±1.43 10.736±0.89 9.756±2.40 6.189±2.03 15.772±1.82 3.478±0.74 10.219±0.82 6.775±1.81 6.854±1.07 3.672±0.65 11.957±2.92 11.421±1.80 7.278±0.79
ENSMUST00000108803 N/A 1.432±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129977 2.652±0.00 1.386±0.00 N/A N/A N/A 4.267±0.00 0.949±0.00 N/A N/A N/A N/A 2.823±0.00 N/A N/A
ENSMUST00000176159 N/A N/A N/A 40.778±0.00 N/A N/A N/A N/A N/A N/A N/A 54.479±0.00 30.866±1.14 16.705±0.00
ENSMUST00000176279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050751 ENSMUST00000052580 N/A 1.139±0.29 1.303±0.10 8.644±9.02 0.044±0.01 0.904±0.57 N/A 0.176±0.02 0.081±0.01 0.132±0.03 0.063±0.04 6.391±2.65 0.051±0.04 3.098±1.96
ENSMUST00000128312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136892 0.081±0.02 N/A N/A N/A 0.039±0.01 0.610±0.08 0.155±0.02 0.036±0.00 N/A 0.137±0.02 0.061±0.00 N/A N/A 2.567±0.00
ENSMUST00000140012 2.195±1.48 2.991±0.65 2.420±0.05 5.304±1.34 0.030±0.00 0.933±0.15 0.080±0.03 0.123±0.03 0.056±0.02 0.079±0.02 0.138±0.01 10.546±3.66 0.222±0.02 2.512±0.51
ENSMUST00000140126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A
ENSMUST00000172566 N/A N/A N/A N/A N/A 1.206±0.00 N/A N/A N/A N/A N/A N/A 0.065±0.05 N/A

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