C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutrophil cytosolic factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367535 NCF2-002 ENSG00000116701 9606 - 1:183555725-183590581 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367535
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367535 0.756±0.00 0.137±0.00 3.138±0.00 1.050±0.00 0.765±0.00 0.405±0.00 2.258±0.00 11.672±0.66 0.663±0.00 1.352±0.75 5.318±2.82 0.358±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BJ CIL_0001BJ_0002 CGP 1:183248237-183598246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006801 TAS superoxide metabolic process
GO:0006968 TAS cellular defense response
GO:0007568 IEA aging
GO:0008022 IPI protein C-terminus binding
GO:0009055 TAS electron carrier activity
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0014823 IEA response to activity
GO:0016020 IEA membrane
GO:0032010 TAS phagolysosome
GO:0032496 IEA response to lipopolysaccharide
GO:0032570 IEA response to progesterone
GO:0032870 IEA cellular response to hormone stimulus
GO:0033993 IEA response to lipid
GO:0034616 IEA response to laminar fluid shear stress
GO:0042493 IEA response to drug
GO:0042554 TAS superoxide anion generation
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043020 TAS NADPH oxidase complex
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0045087 TAS innate immune response
GO:0045730 TAS respiratory burst
GO:0045777 IEA positive regulation of blood pressure
GO:0048365 IEA Rac GTPase binding
GO:0051701 TAS interaction with host
GO:0055093 IEA response to hyperoxia
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027754 Ncf2-201 protein_coding Mus_musculus 0 1535
ENSMUST00000186568 Ncf2-001 protein_coding Mus_musculus 0 1535
ENSMUST00000122415 Gm9025-001 processed_pseudogene Mus_musculus 0 1478

Loading