Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	neutrophil cytosolic factor 2
ENST00000367536	NCF2-001	ENSG00000116701	9606	-	1:183555563-183590876	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000367536	4.632±0.00	2.021±0.00	0.108±0.00	1.311±0.00	2.596±1.90	1.356±1.20	0.681±0.00	0.642±0.12	0.870±0.00	6.856±0.00	1.487±0.00	2.386±0.24	5.869±0.68	1.535±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0001BJ	CIL_0001BJ_0002	CGP	1:183248237-183598246

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0002474	TAS	antigen processing and presentation of peptide antigen via MHC class I
GO:0002479	TAS	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515	IPI:IEA	protein binding
GO:0005730	IDA	nucleolus
GO:0005737	IDA	cytoplasm
GO:0005829	TAS	cytosol
GO:0006801	TAS	superoxide metabolic process
GO:0006968	TAS	cellular defense response
GO:0008022	IPI	protein C-terminus binding
GO:0009055	TAS	electron carrier activity
GO:0032010	TAS	phagolysosome
GO:0042554	TAS	superoxide anion generation
GO:0042590	TAS	antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043020	TAS	NADPH oxidase complex
GO:0045087	TAS	innate immune response
GO:0045730	TAS	respiratory burst
GO:0051701	TAS	interaction with host
GO:0090382	TAS	phagosome maturation

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000027754	Ncf2-201	protein_coding	Mus_musculus	0	1535
ENSMUST00000186568	Ncf2-001	protein_coding	Mus_musculus	0	1535
ENSMUST00000122415	Gm9025-001	processed_pseudogene	Mus_musculus	0	1478

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