C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polyamine-modulated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368277 PMF1-001 ENSG00000160783 9606 + 1:156213007-156240042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368277 26.746±0.00 49.224±0.00 5.608±0.00 5.157±0.00 18.557±15.53 7.193±4.11 17.046±13.16 27.253±9.53 22.199±0.00 30.909±0.00 18.026±3.90 36.623±14.23 42.426±13.00 16.604±7.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000444 IDA MIS12/MIND type complex
GO:0003713 IMP transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0043522 IPI leucine zipper domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056370 Pmf1-201 protein_coding Mus_musculus 0 470

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