C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polyamine-modulated factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368279 PMF1-002 ENSG00000160783 9606 + 1:156212993-156240040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLiverLungOvaryENST00000368279
Transcript ID Adrenal Colon Heart Liver Lung Ovary
ENST00000368279 16.444±0.00 0.709±0.00 1.156±0.00 1.529±0.00 5.908±0.00 5.635±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0008JO CIL_0008JO_0001 VISTA 1:156202708-156805613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000444 IDA MIS12/MIND type complex
GO:0003713 IMP transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0043522 IPI leucine zipper domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056370 Pmf1-201 protein_coding Mus_musculus 0 248

Loading