C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368304 LAMTOR2-002 ENSG00000116586 9606 + 1:156054792-156058506 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleENST00000368304
Transcript ID Brain Colon Heart Liver Muscle
ENST00000368304 9.339±0.00 0.987±0.00 2.320±1.77 0.983±0.00 8.371±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IDA guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005765 IDA lysosomal membrane
GO:0005770 ISS late endosome
GO:0016049 IMP cell growth
GO:0032008 IMP positive regulation of TOR signaling
GO:0032947 IDA protein complex scaffold
GO:0034613 IMP cellular protein localization
GO:0043547 IDA positive regulation of GTPase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071230 IMP cellular response to amino acid stimulus
GO:0071986 IDA Ragulator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145172 Lamtor2-002 retained_intron Mus_musculus 0 339
ENSMUST00000029698 Lamtor2-001 protein_coding Mus_musculus 0 339
ENSMUST00000119002 Lamtor2-003 protein_coding Mus_musculus 0 215
ENSMUST00000156421 Lamtor2-004 processed_transcript Mus_musculus 2e-27 126

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