C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF3 interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368731 TRAF3IP2-006 ENSG00000056972 9606 - 6:111558961-111573986 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyOvaryENST00000368731
Transcript ID Bladder Brain Breast Kidney Ovary
ENST00000368731 0.667±0.00 2.533±0.00 2.571±0.00 0.393±0.00 4.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000954 CIL_000954_0001 VISTA 6:111250485-111855465
CIL_0001OP CIL_0001OP_0002 CGP 6:111299028-111606278

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019987 Traf3ip2-001 protein_coding Mus_musculus 0 754
ENSMUST00000156016 Traf3ip2-003 retained_intron Mus_musculus 0 529
ENSMUST00000155945 Traf3ip2-005 retained_intron Mus_musculus 0 337
ENSMUST00000131629 Traf3ip2-004 processed_transcript Mus_musculus 0 226

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