C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sex comb on midleg-like 4 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369020 SCML4-005 ENSG00000146285 9606 - 6:107705200-107824312 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyTestisENST00000369020
Transcript ID Kidney Testis
ENST00000369020 0.047±0.00 0.712±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063063 Scml4-002 protein_coding Mus_musculus 0 979
ENSMUST00000105494 Scml4-003 protein_coding Mus_musculus 0 826
ENSMUST00000130511 Scml4-004 retained_intron Mus_musculus 0 532
ENSMUST00000127675 Scml4-006 processed_transcript Mus_musculus 0 394

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