C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 and PX domains 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369774 SH3PXD2A-001 ENSG00000107957 9606 - 10:103594027-103855543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000369774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000369774 4.197±0.00 1.234±0.00 0.449±0.00 3.890±0.00 1.600±0.06 2.734±0.22 0.888±0.41 0.693±0.37 1.405±1.12 2.357±0.38 2.850±1.19 2.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T9 CIL_0006T9_0001 CGP 10:103493979-103855543
CIL_0006UD CIL_0006UD_0001 CGP 10:103594027-103918205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002102 IDA podosome
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006801 IDA superoxide metabolic process
GO:0030054 IEA cell junction
GO:0035091 IEA phosphatidylinositol binding
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081619 Sh3pxd2a-201 protein_coding Mus_musculus 0 3980
ENSMUST00000111800 Sh3pxd2a-202 protein_coding Mus_musculus 0 2599

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