C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: pre-mRNA processing factor 38B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370022 PRPF38B-004 ENSG00000134186 9606 + 1:108692324-108697504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENST00000370022
Transcript ID Heart Kidney Liver Muscle
ENST00000370022 0.371±0.00 0.767±0.00 1.295±0.00 2.009±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029480 Prpf38b-001 protein_coding Mus_musculus 0 966
ENSMUST00000145720 Prpf38b-002 processed_transcript Mus_musculus 0 564
ENSMUST00000129273 Prpf38b-003 processed_transcript Mus_musculus 0 538

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