C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | AF4/FMR2 family, member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000370460  |
AFF2-001 |
ENSG00000155966 |
9606 | + |
X:148500619-149000663  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007PX | CIL_0007PX_0001 | VISTA | X:148447492-149048635 |
| CIL_0000PK | CIL_0000PK_0002 | CGP | X:148500619-149521096 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0002151 | ISS | G-quadruplex RNA binding |
| GO:0006397 | IEA | mRNA processing |
| GO:0007420 | TAS | brain development |
| GO:0007611 | IEA | learning or memory |
| GO:0008380 | IEA | RNA splicing |
| GO:0016607 | IDA | nuclear speck |
| GO:0043484 | IMP | regulation of RNA splicing |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000033532
|
Aff2-001 | protein_coding | Mus_musculus | 0 | 3214 |
|
ENSMUST00000143097
|
Aff2-002 | processed_transcript | Mus_musculus | 0 | 1339 |
|
ENSMUST00000139977
|
Aff2-004 | processed_transcript | Mus_musculus | 0 | 584 |
|
ENSMUST00000151662
|
Aff2-003 | retained_intron | Mus_musculus | 0 | 532 |
