C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052242-ENSDARG00000071699 CGP 7955 14:21343820-21893036
GeneTranscriptPositionBiotype
ENSDARG00000052242 (aff2)
AF4/FMR2 family, member 2 		ENSDART00000074070 (aff2-001) 21343820-21738251 protein_coding
ENSDARG00000071699 (ids)
iduronate 2-sulfatase 		ENSDART00000106205 (ids-001) 21870885-21893012 protein_coding
ENSDART00000132499 (ids-002) 21892151-21893036 retained_intron

Danio rerio Ensembl (Zv9)

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Transcripts
Structures from Ensembl
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CIL_0000PK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155966-ENSG00000010404 CGP 9606 X:148500619-149521096
GeneTranscriptPositionBiotype
ENSG00000010404 (IDS)
iduronate 2-sulfatase 		ENST00000340855 (IDS-001) 149476990-149505347 protein_coding
ENST00000370441 (IDS-004) 149487131-149505347 protein_coding
ENST00000428056 (IDS-002) 149502660-149505280 protein_coding
ENST00000464251 (IDS-005) 149487287-149504219 nonsense_mediated_decay
ENST00000466019 (IDS-007) 149495483-149498266 processed_transcript
ENST00000466323 (IDS-003) 149487131-149505347 nonsense_mediated_decay
ENST00000490775 (IDS-006) 149487160-149503388 processed_transcript
ENST00000521702 (IDS-008) 149503471-149521096 protein_coding
ENSG00000155966 (AFF2)
AF4/FMR2 family, member 2 		ENST00000286437 (AFF2-201) 148719091-149000663 protein_coding
ENST00000342251 (AFF2-003) 148500708-148994424 protein_coding
ENST00000370457 (AFF2-202) 148500619-149000663 protein_coding
ENST00000370458 (AFF2-002) 148501009-148904377 protein_coding
ENST00000370460 (AFF2-001) 148500619-149000663 protein_coding
ENSG00000222313 (RN7SKP267)
RNA, 7SK small nuclear pseudogene 267 		ENST00000410381 (RN7SKP267-201) 148822164-148822448 misc_RNA
ENSG00000223516 (AFF2-IT1)
AFF2 intronic transcript 1 (non-protein coding) 		ENST00000435346 (AFF2-IT1-001) 148546878-148547397 sense_intronic
ENSG00000241489 (IDS)
Iduronate 2-sulfatase (Hunter syndrome), isoform CRA_e {ECO:0000313|EMBL:EAW61285.1}; Uncharacterized protein {ECO:0000313|Ensem 		ENST00000422081 (IDS-006) 149482543-149533935 protein_coding
ENST00000427113 (IDS-002) 149502087-149532968 processed_transcript
ENST00000441880 (IDS-005) 149483090-149532994 processed_transcript
ENST00000523759 (IDS-007) 149498187-149533137 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PK_0001ENSDARG00000052242ENSDART00000074070ENSDARG00000071699ENSDART00000106205ENSDART00000132499CIL_0000PK_0002ENSG00000010404ENST00000340855ENST00000370441ENST00000428056ENST00000464251ENST00000466019ENST00000466323ENST00000490775ENST00000521702ENSG00000155966ENST00000286437ENST00000342251ENST00000370457ENST00000370458ENST00000370460ENSG00000222313ENST00000410381ENSG00000223516ENST00000435346ENSG00000241489ENST00000422081ENST00000427113ENST00000441880ENST00000523759
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PK_0001ENSDARG00000052242ENSDART00000074070ENSDARG00000071699ENSDART00000106205ENSDART00000132499CIL_0000PK_0002ENSG00000010404ENST00000340855ENST00000370441ENST00000428056ENSG00000155966ENST00000286437ENST00000342251ENST00000370457ENST00000370458ENSG00000222313ENST00000410381ENSG00000223516ENST00000435346ENSG00000241489ENST00000422081
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052242 ENSDART00000074070 N/A N/A N/A 3.795±0.68 N/A N/A 0.332±0.06 0.174±0.04 0.032±0.00 N/A 0.264±0.00 N/A N/A N/A
ENSDARG00000071699 ENSDART00000106205 N/A N/A N/A 2.067±0.07 N/A N/A 2.697±0.91 3.251±2.56 0.354±0.00 N/A 0.388±0.00 N/A N/A N/A
ENSDART00000132499 N/A N/A N/A 6.069±1.32 N/A N/A N/A 1.393±0.02 N/A N/A 0.292±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000010404 ENST00000340855 N/A N/A 1.290±0.00 N/A N/A 3.881±0.00 1.977±0.00 N/A 2.517±1.09 6.783±0.00 0.946±0.00 5.954±5.06 7.398±2.20 6.275±0.00
ENST00000370441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.992±0.00 N/A N/A N/A
ENST00000428056 N/A N/A 4.966±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155966 ENST00000286437 N/A 0.037±0.00 N/A 0.346±0.00 0.176±0.00 0.024±0.00 0.011±0.00 N/A 0.009±0.00 0.100±0.00 N/A 0.174±0.21 1.022±0.19 0.677±0.24
ENST00000342251 0.109±0.00 0.019±0.00 0.094±0.00 0.793±0.32 0.198±0.11 0.116±0.00 0.029±0.00 0.213±0.00 N/A 0.612±0.07 0.086±0.00 0.196±0.17 1.453±0.41 0.748±0.26
ENST00000370457 N/A 0.012±0.00 N/A 0.488±0.07 N/A 0.008±0.00 N/A 0.048±0.00 0.124±0.00 0.621±0.00 N/A N/A 0.570±0.00 0.200±0.00
ENST00000370458 N/A N/A N/A 3.126±0.00 N/A 0.415±0.00 0.074±0.00 0.026±0.00 0.641±0.00 1.787±0.00 N/A 1.265±0.00 N/A N/A
ENST00000370460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222313 ENST00000410381 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.434±0.00 N/A N/A N/A N/A
ENSG00000223516 ENST00000435346 N/A N/A 0.268±0.00 N/A N/A N/A N/A N/A N/A 2.426±0.00 N/A 0.925±0.85 N/A N/A
ENSG00000241489 ENST00000422081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.542±0.00 N/A N/A N/A
ENST00000427113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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