C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370698 SLC9A6-001 ENSG00000198689 9606 + X:135985468-136047264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000370698
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000370698 3.727±0.00 1.414±0.00 8.193±0.00 1.564±0.00 1.809±0.00 0.917±0.00 0.665±0.00 3.194±0.00 1.260±0.33 0.896±0.00 1.562±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GK CIL_0000GK_0002 CGP X:135962070-136047264
CIL_0000PQ CIL_0000PQ_0003 CGP X:135985439-136211359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0031901 IDA early endosome membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0048675 IDA axon extension
GO:0048812 IDA neuron projection morphogenesis
GO:0055038 IDA recycling endosome membrane
GO:0055085 TAS:IEA transmembrane transport
GO:0097484 IDA dendrite extension
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114784 Slc9a6-002 protein_coding Mus_musculus 0 4626
ENSMUST00000077741 Slc9a6-001 protein_coding Mus_musculus 0 4215
ENSMUST00000144068 Slc9a6-003 protein_coding Mus_musculus 0 651

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