C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370701 SLC9A6-003 ENSG00000198689 9606 + X:135985439-136047139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370701
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370701 2.726±0.00 12.844±6.00 2.462±0.32 2.438±0.00 2.888±1.33 2.405±1.05 0.951±0.00 0.530±0.00 3.015±2.31 2.116±1.06 0.889±0.22 1.893±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GK CIL_0000GK_0002 CGP X:135962070-136047264
CIL_0000PQ CIL_0000PQ_0003 CGP X:135985439-136211359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0006811 TAS ion transport
GO:0006812 IEA cation transport
GO:0006814 IEA sodium ion transport
GO:0006885 IEA regulation of pH
GO:0015299 IEA solute:proton antiporter activity
GO:0015385 IEA sodium:proton antiporter activity
GO:0016021 IEA integral component of membrane
GO:0031901 IDA early endosome membrane
GO:0035725 IEA sodium ion transmembrane transport
GO:0048675 IDA axon extension
GO:0048812 IDA neuron projection morphogenesis
GO:0055038 IDA recycling endosome membrane
GO:0055085 TAS:IEA transmembrane transport
GO:0097484 IDA dendrite extension
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077741 Slc9a6-001 protein_coding Mus_musculus 0 4678
ENSMUST00000114784 Slc9a6-002 protein_coding Mus_musculus 0 4087
ENSMUST00000144068 Slc9a6-003 protein_coding Mus_musculus 0 1251

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