C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, ZZ domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089982 Zzz3-002 ENSMUSG00000039068 10090 + 3:152396684-152459477 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000089982
Transcript ID Adipose Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000089982 2.528±0.53 1.696±0.06 0.587±0.00 1.254±0.53 0.965±0.33 8.203±2.47 7.305±3.63 2.851±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850
CIL_0007KB CIL_0007KB_0002 UCNEbase 3:152232542-152459476
CIL_0002Y2 CIL_0002Y2_0002 CGP 3:152346478-152462826
CIL_0002XM CIL_0002XM_0002 CGP 3:152395473-152668140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370798 ZZZ3-002 protein_coding Homo_sapiens 0 1960
ENST00000370801 ZZZ3-001 protein_coding Homo_sapiens 0 4460
ENST00000414381 ZZZ3-009 protein_coding Homo_sapiens 0 527
ENST00000433749 ZZZ3-010 protein_coding Homo_sapiens 0 695
ENST00000463166 ZZZ3-006 processed_transcript Homo_sapiens 0 348
ENST00000474746 ZZZ3-011 processed_transcript Homo_sapiens 0 462
ENST00000476195 ZZZ3-005 processed_transcript Homo_sapiens 0 545
ENST00000476275 ZZZ3-003 processed_transcript Homo_sapiens 0 1905
ENST00000481346 ZZZ3-004 processed_transcript Homo_sapiens 0 2601

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