C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, ZZ domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106100 Zzz3-001 ENSMUSG00000039068 10090 + 3:152396003-152462826 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106100
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106100 3.700±0.42 2.400±1.41 2.777±0.05 6.890±2.38 1.084±0.16 1.919±1.13 1.444±0.43 3.162±0.79 1.860±0.77 2.213±1.11 0.817±0.26 5.672±0.98 3.307±1.56 0.673±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850
CIL_0007KB CIL_0007KB_0002 UCNEbase 3:152232542-152459476
CIL_0002Y2 CIL_0002Y2_0002 CGP 3:152346478-152462826
CIL_0002XM CIL_0002XM_0002 CGP 3:152395473-152668140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370798 ZZZ3-002 protein_coding Homo_sapiens 0 1975
ENST00000370801 ZZZ3-001 protein_coding Homo_sapiens 0 4481
ENST00000414381 ZZZ3-009 protein_coding Homo_sapiens 0 531
ENST00000433749 ZZZ3-010 protein_coding Homo_sapiens 0 632
ENST00000463166 ZZZ3-006 processed_transcript Homo_sapiens 0 348
ENST00000474746 ZZZ3-011 processed_transcript Homo_sapiens 0 448
ENST00000476195 ZZZ3-005 processed_transcript Homo_sapiens 0 531
ENST00000476275 ZZZ3-003 processed_transcript Homo_sapiens 0 1905
ENST00000481346 ZZZ3-004 processed_transcript Homo_sapiens 0 2639

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