C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prefoldin subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371419 PFDN4-001 ENSG00000101132 9606 + 20:54207847-54219953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371419
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371419 4.366±0.00 0.902±0.00 0.839±0.44 1.308±0.03 0.787±0.15 0.523±0.18 0.622±0.26 0.277±0.06 1.543±0.87 1.748±1.05 2.970±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HH CIL_0001HH_0001 CGP 20:54153449-54228052

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 NAS cytosol
GO:0006457 TAS:IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0044267 TAS cellular protein metabolic process
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051087 TAS chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063682 Pfdn4-001 protein_coding Mus_musculus 0 765
ENSMUST00000109148 Pfdn4-003 protein_coding Mus_musculus 0 712
ENSMUST00000075087 Pfdn4-006 protein_coding Mus_musculus 0 704
ENSMUST00000136839 Pfdn4-004 protein_coding Mus_musculus 0 446

Loading