C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spalt-like transcription factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371539 SALL4-201 ENSG00000101115 9606 - 20:51784046-51802509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonLungOvaryPlacentaENST00000371539
Transcript ID Adrenal Bladder Breast Colon Lung Ovary Placenta
ENST00000371539 0.073±0.00 0.051±0.00 0.603±0.00 0.042±0.00 0.134±0.00 0.918±0.00 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007I5 CIL_0007I5_0001 CGP 20:51596514-51802520
CIL_0001H1 CIL_0001H1_0001 CGP 20:51784042-52204308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103074 Sall4-002 protein_coding Mus_musculus 0 215
ENSMUST00000029061 Sall4-001 protein_coding Mus_musculus 0 215
ENSMUST00000130640 Sall4-003 processed_transcript Mus_musculus 0 189

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