C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90kDa alpha (cytosolic), class B member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371646 HSP90AB1-003 ENSG00000096384 9606 + 6:44247087-44253886 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371646 239.388±0.00 227.062±0.00 42.753±0.00 284.949±84.29 175.160±52.79 314.328±247.52 118.215±45.32 162.427±103.35 101.490±16.70 262.720±173.26 198.761±122.79 346.328±100.91 223.354±67.36 232.737±93.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 IDA double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 TAS cytosol
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0006986 NAS response to unfolded protein
GO:0007411 TAS axon guidance
GO:0008180 IDA COP9 signalosome
GO:0016020 IDA membrane
GO:0023026 IDA MHC class II protein complex binding
GO:0030235 ISS nitric-oxide synthase regulator activity
GO:0030911 ISS TPR domain binding
GO:0032435 IMP negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0035872 TAS nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0044822 IDA poly(A) RNA binding
GO:0045087 TAS innate immune response
GO:0045429 ISS positive regulation of nitric oxide biosynthetic process
GO:0051082 IEA unfolded protein binding
GO:0060334 IMP regulation of interferon-gamma-mediated signaling pathway
GO:0060338 IMP regulation of type I interferon-mediated signaling pathway
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024739 Hsp90ab1-001 protein_coding Mus_musculus 0 2784
ENSMUST00000119727 Gm6368-001 processed_pseudogene Mus_musculus 0 2152
ENSMUST00000119159 Gm13498-001 processed_pseudogene Mus_musculus 0 2100
ENSDART00000020084 hsp90ab1-001 protein_coding Danio_rerio 0 1604
ENSDART00000023550 hsp90aa1.2-001 protein_coding Danio_rerio 0 1336
ENSDART00000129014 hsp90ab1-201 protein_coding Danio_rerio 0 1114
ENSMUST00000166469 Hsp90ab1-006 protein_coding Mus_musculus 0 701
ENSMUST00000146770 Hsp90ab1-004 retained_intron Mus_musculus 0 564
ENSMUST00000145205 Hsp90ab1-005 retained_intron Mus_musculus 0 516
ENSMUST00000151306 Hsp90ab1-003 retained_intron Mus_musculus 0 446
ENSMUST00000118187 Gm11875-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000163966 Hsp90ab1-007 nonsense_mediated_decay Mus_musculus 0 390
ENSMUST00000130406 Hsp90ab1-002 protein_coding Mus_musculus 0 351
ENSMUST00000117774 Gm14107-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000165127 Hsp90ab1-008 protein_coding Mus_musculus 0 241

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