C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 90 alpha (cytosolic), class B member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166469 Hsp90ab1-006 ENSMUSG00000023944 10090 - 17:45569578-45573255 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000166469
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000166469 341.799±0.00 1013.470±0.00 788.253±535.74 264.537±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0002 VISTA 17:45025360-45628753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001890 IMP placenta development
GO:0003725 ISO double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005622 IDA intracellular
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006457 IEA protein folding
GO:0006950 IEA response to stress
GO:0051082 IEA unfolded protein binding
GO:0071353 IDA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353801 HSP90AB1-004 protein_coding Homo_sapiens 0 701
ENST00000371554 HSP90AB1-005 protein_coding Homo_sapiens 0 701
ENST00000371646 HSP90AB1-003 protein_coding Homo_sapiens 0 701
ENST00000426420 HSP90AB6P-001 processed_pseudogene Homo_sapiens 0 466
ENST00000505987 HSP90AB3P-001 processed_pseudogene Homo_sapiens 0 678
ENST00000507090 HSP90AB2P-002 transcribed_processed_pseudogene Homo_sapiens 0 590
ENST00000517330 CTD-2179L22.1-001 transcribed_processed_pseudogene Homo_sapiens 0 322
ENST00000523204 AP3B1-006 processed_transcript Homo_sapiens 0 191
ENST00000602906 HSP90AB2P-001 processed_transcript Homo_sapiens 0 344
ENST00000620073 HSP90AB1-201 protein_coding Homo_sapiens 0 701

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