C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, mu 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372745 AP3M1-002 ENSG00000185009 9606 - 10:74122964-74150842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryTestisENST00000372745
Transcript ID Brain Kidney Ovary Testis
ENST00000372745 2.141±0.33 5.637±0.00 8.396±0.02 6.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008T CIL_00008T_0001 CGP 10:73995193-74151063
CIL_00092U CIL_00092U_0001 VISTA 10:74118007-74719242
CIL_00016K CIL_00016K_0001 CGP 10:74120255-74709303

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005764 TAS lysosome
GO:0005765 IDA lysosomal membrane
GO:0005794 IEA Golgi apparatus
GO:0006622 TAS protein targeting to lysosome
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0008089 ISS anterograde axon cargo transport
GO:0016192 IEA vesicle-mediated transport
GO:0017137 IPI Rab GTPase binding
GO:0030131 IEA clathrin adaptor complex
GO:0031410 IEA cytoplasmic vesicle
GO:0048490 ISS anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154460 Ap3m1-001 protein_coding Mus_musculus 0 2691
ENSMUST00000177652 Ap3m1-ps-201 pseudogene Mus_musculus 0 2687
ENSMUST00000022371 Ap3m1-002 protein_coding Mus_musculus 0 1753
ENSMUST00000130291 Ap3m1-003 protein_coding Mus_musculus 0 793
ENSMUST00000130370 Ap3m1-006 protein_coding Mus_musculus 0 688
ENSMUST00000126536 Ap3m1-005 nonsense_mediated_decay Mus_musculus 0 606
ENSMUST00000156716 Ap3m1-004 processed_transcript Mus_musculus 0 534
ENSMUST00000148886 Ap3m1-007 processed_transcript Mus_musculus 0 416

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