C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hepatocyte nuclear factor 4, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372920 HNF4A-003 ENSG00000101076 9606 + 20:44401270-44431386 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLungOvaryPlacentaTestisENST00000372920
Transcript ID Bladder Brain Colon Kidney Lung Ovary Placenta Testis
ENST00000372920 1.992±0.00 0.061±0.00 3.853±0.00 5.953±0.00 0.019±0.00 0.852±0.73 0.015±0.00 0.608±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R9 CIL_0007R9_0001 VISTA 20:44272530-44874028
CIL_0006S2 CIL_0006S2_0002 CGP 20:44336986-44432845

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018094 Hnf4a-201 protein_coding Mus_musculus 0 1705
ENSMUST00000109411 Hnf4a-001 protein_coding Mus_musculus 0 1705
ENSMUST00000137449 Hnf4a-004 protein_coding Mus_musculus 0 682
ENSMUST00000131658 Hnf4a-003 processed_transcript Mus_musculus 0 682

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