C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolyl 4-hydroxylase, alpha polypeptide I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373008 P4HA1-002 ENSG00000122884 9606 - 10:73007217-73096850 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373008 2.828±0.00 3.164±0.00 2.656±0.00 2.088±0.05 7.143±3.21 13.402±10.33 8.529±3.73 6.445±0.00 3.886±2.21 13.021±0.27 14.193±0.00 8.164±1.18 9.499±2.34 6.626±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QA CIL_0008QA_0001 VISTA 10:72591086-73192639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004656 IEA procollagen-proline 4-dioxygenase activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI:IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005783 IDA:IEA endoplasmic reticulum
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0016702 IEA oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418 IEA L-ascorbic acid binding
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105466 P4ha1-002 protein_coding Mus_musculus 0 2074
ENSMUST00000009789 P4ha1-001 protein_coding Mus_musculus 0 1947
ENSMUST00000092512 P4ha1-003 protein_coding Mus_musculus 0 1238

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