C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POU class 3 homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373012 POU3F1-001 ENSG00000185668 9606 - 1:38043827-38046794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373012
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373012 0.133±0.00 0.158±0.00 1.729±1.63 0.028±0.00 0.043±0.00 0.048±0.00 0.109±0.09 0.079±0.00 0.038±0.03 0.120±0.00 0.222±0.10 0.149±0.09 1.569±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016
CIL_0007UI CIL_0007UI_0001 VISTA 1:37794522-38395934
CIL_0008NZ CIL_0008NZ_0001 VISTA 1:37861857-38463593
CIL_0008EP CIL_0008EP_0001 VISTA 1:37891108-38491954
CIL_000892 CIL_000892_0001 VISTA 1:37897137-38498368
CIL_0007QI CIL_0007QI_0001 VISTA 1:37946403-38547845
CIL_0008ZP CIL_0008ZP_0001 VISTA 1:37962513-38566844
CIL_0007QK CIL_0007QK_0001 VISTA 1:37970270-38571704
CIL_0008II CIL_0008II_0001 VISTA 1:38026326-38627661
CIL_0008SL CIL_0008SL_0001 VISTA 1:38036216-38636958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001105 IEA RNA polymerase II transcription coactivator activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008366 TAS axon ensheathment
GO:0008544 IEA epidermis development
GO:0010628 ISS positive regulation of gene expression
GO:0014044 IEA Schwann cell development
GO:0022011 IEA myelination in peripheral nervous system
GO:0030216 IEA keratinocyte differentiation
GO:0030900 IEA forebrain development
GO:0042552 IEA myelination
GO:0043565 IDA sequence-specific DNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053491 Pou3f1-001 protein_coding Mus_musculus 0 3635
ENSMUST00000054883 Pou3f3-001 protein_coding Mus_musculus 0 553
ENSDART00000110243 pou3f2a-201 protein_coding Danio_rerio 0 514
ENSMUST00000178174 Pou3f2-001 protein_coding Mus_musculus 0 446
ENSDART00000044803 pou2f3-201 protein_coding Danio_rerio 0.000000000000005 88
ENSDART00000014127 pou2f2a-201 protein_coding Danio_rerio 0.00000000001 77
ENSDART00000133371 pou2f2a-001 protein_coding Danio_rerio 0.00000000001 77

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