C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8228
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189949 RP23-230A14.1-001 ENSMUSG00000099779 10090 - 9:84973053-84976515 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000189949
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000189949 0.054±0.00 0.023±0.00 0.094±0.03 0.161±0.00 0.019±0.00 0.048±0.05 0.019±0.02 0.052±0.04 0.035±0.04 0.056±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373585 DDX50-001 protein_coding Homo_sapiens 0 2920
ENST00000420470 ARHGEF38-001 protein_coding Homo_sapiens 0 1099
ENST00000438163 DDX50P1-001 processed_pseudogene Homo_sapiens 0 1690
ENST00000460470 DDX50-004 processed_transcript Homo_sapiens 0 651
ENST00000463545 DDX50P2-001 processed_pseudogene Homo_sapiens 0 2311
ENST00000466265 DDX50-005 processed_transcript Homo_sapiens 0 878
ENST00000471475 DDX50-002 nonsense_mediated_decay Homo_sapiens 0 697
ENST00000483593 DDX50-003 nonsense_mediated_decay Homo_sapiens 0 765
ENST00000503155 RP11-311D14.1-001 processed_pseudogene Homo_sapiens 0 1096
ENST00000610822 DDX50-201 protein_coding Homo_sapiens 0 2815
ENST00000612682 DDX50-202 protein_coding Homo_sapiens 0 2900

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