C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: obscurin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373876 OBSL1-001 ENSG00000124006 9606 - 2:219550756-219571241 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENST00000373876
Transcript ID Heart Liver
ENST00000373876 0.772±0.00 0.781±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_00082R CIL_00082R_0001 VISTA 2:219549147-220152579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113567 Obsl1-001 protein_coding Mus_musculus 0 5806
ENSMUST00000155084 Obsl1-012 protein_coding Mus_musculus 0 3779
ENSMUST00000113565 Obsl1-010 protein_coding Mus_musculus 0 3373
ENSMUST00000145306 Obsl1-003 retained_intron Mus_musculus 0 2473
ENSMUST00000127507 Obsl1-005 retained_intron Mus_musculus 0 1866
ENSMUST00000129403 Obsl1-004 retained_intron Mus_musculus 0 1786
ENSMUST00000132252 Obsl1-006 protein_coding Mus_musculus 0 479
ENSMUST00000156705 Obsl1-014 retained_intron Mus_musculus 0 412
ENSMUST00000154636 Obsl1-011 retained_intron Mus_musculus 0 302

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