C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 6 open reading frame 106
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374023 C6orf106-001 ENSG00000196821 9606 - 6:34587288-34696847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374023 17.041±0.00 22.308±0.00 1.320±0.00 14.715±13.56 29.148±27.24 16.660±11.68 30.431±29.44 20.237±17.38 18.638±15.75 26.197±24.07 42.796±39.38 10.830±6.16 15.245±3.51 30.934±9.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LT CIL_0004LT_0002 CGP 6:34537802-34696859
CIL_000258 CIL_000258_0001 CGP 6:34587288-34773794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114863 D17Wsu92e-001 protein_coding Mus_musculus 0 1762
ENSMUST00000075076 D17Wsu92e-002 protein_coding Mus_musculus 0 1219
ENSMUST00000114859 D17Wsu92e-003 protein_coding Mus_musculus 0 968
ENSDART00000114920 C6H6orf106-201 protein_coding Danio_rerio 0 475
ENSDART00000156501 C6H6orf106-001 protein_coding Danio_rerio 0 475
ENSMUST00000187301 RP23-128A11.6-001 processed_pseudogene Mus_musculus 0 272

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