C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deafness, autosomal recessive 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374059 DFNB31-002 ENSG00000095397 9606 - 9:114402081-114426071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverLungOvaryENST00000374059
Transcript ID Adipose Adrenal Brain Breast Liver Lung Ovary
ENST00000374059 0.079±0.00 0.634±0.00 0.404±0.00 0.240±0.10 0.044±0.00 1.724±0.00 1.329±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C9 CIL_0002C9_0002 CGP 9:114334156-114505450
CIL_0004P9 CIL_0004P9_0001 CGP 9:114402080-114598373

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107393 Whrn-004 protein_coding Mus_musculus 0 1423
ENSMUST00000063650 Whrn-001 protein_coding Mus_musculus 0 1419
ENSMUST00000124016 Whrn-011 processed_transcript Mus_musculus 0 1419
ENSMUST00000155058 Whrn-009 retained_intron Mus_musculus 0 1408
ENSMUST00000119294 Whrn-007 protein_coding Mus_musculus 0 1404
ENSMUST00000102867 Whrn-002 protein_coding Mus_musculus 0 1400
ENSMUST00000063672 Whrn-017 protein_coding Mus_musculus 0 503
ENSMUST00000084510 Whrn-005 protein_coding Mus_musculus 0 503
ENSMUST00000145133 Whrn-010 retained_intron Mus_musculus 0 492
ENSMUST00000095038 Whrn-006 protein_coding Mus_musculus 0 488
ENSMUST00000095037 Whrn-008 protein_coding Mus_musculus 0 220

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