C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374264 SUSD1-006 ENSG00000106868 9606 - 9:112041079-112175267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000374264
Transcript ID Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000374264 0.719±0.00 0.658±0.31 0.243±0.00 0.660±0.00 1.344±0.00 1.145±0.00 1.021±0.00 3.836±2.11 1.303±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XW CIL_0000XW_0001 CGP 9:111896766-112175408
CIL_0005X7 CIL_0005X7_0001 CGP 9:112040785-112333667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040166 Susd1-201 protein_coding Mus_musculus 0 1716
ENSMUST00000107544 Susd1-001 protein_coding Mus_musculus 0 1696
ENSMUST00000136562 Susd1-003 retained_intron Mus_musculus 0 342
ENSMUST00000136077 Susd1-002 retained_intron Mus_musculus 0 339

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