C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374270 SUSD1-003 ENSG00000106868 9606 - 9:112040785-112175408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000374270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000374270 0.626±0.00 3.483±0.00 1.419±0.00 0.976±0.28 1.067±0.43 2.867±0.00 1.377±0.00 6.475±0.00 0.263±0.00 2.183±1.10 2.557±0.68 1.912±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XW CIL_0000XW_0001 CGP 9:111896766-112175408
CIL_0005X7 CIL_0005X7_0001 CGP 9:112040785-112333667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040166 Susd1-201 protein_coding Mus_musculus 0 1810
ENSMUST00000107544 Susd1-001 protein_coding Mus_musculus 0 1790
ENSMUST00000136562 Susd1-003 retained_intron Mus_musculus 0 342
ENSMUST00000136077 Susd1-002 retained_intron Mus_musculus 0 339

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