C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: StAR-related lipid transfer (START) domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374597 STARD8-003 ENSG00000130052 9606 + X:68693651-68725833 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374597
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374597 6.414±0.00 5.535±0.00 0.623±0.00 2.257±0.00 1.391±0.00 1.319±0.73 2.895±2.60 4.924±3.60 1.149±0.26 4.873±3.47 0.485±0.05 1.096±0.66 5.529±1.88 0.725±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YH CIL_0000YH_0002 CGP X:68498323-68725842
CIL_0001U1 CIL_0001U1_0001 CGP X:68647666-68842147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0008289 IEA lipid binding
GO:0030054 IEA cell junction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036606 Stard8-001 protein_coding Mus_musculus 0 2161
ENSMUST00000127361 Stard8-004 processed_transcript Mus_musculus 0 830
ENSMUST00000135488 Strbp-002 processed_transcript Mus_musculus 0.00002 55

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