C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135488 Strbp-002 ENSMUSG00000026915 10090 - 2:37634928-37703348 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryTestisENSMUST00000135488
Transcript ID Colon Liver Ovary Testis
ENSMUST00000135488 12.991±4.75 4.902±0.00 12.133±1.35 22.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WQ CIL_0006WQ_0002 CGP 2:37432168-37566454

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252336 STARD8-201 protein_coding Homo_sapiens 0.00002 55
ENST00000348403 STRBP-001 protein_coding Homo_sapiens 0 952
ENST00000360998 STRBP-003 protein_coding Homo_sapiens 0 767
ENST00000374597 STARD8-003 protein_coding Homo_sapiens 0.00002 55
ENST00000374599 STARD8-004 protein_coding Homo_sapiens 0.00002 55
ENST00000407982 STRBP-002 nonsense_mediated_decay Homo_sapiens 0 1092
ENST00000447404 STRBP-201 protein_coding Homo_sapiens 0 952
ENST00000479114 STRBP-007 protein_coding Homo_sapiens 0 494
ENST00000523864 STARD8-001 nonsense_mediated_decay Homo_sapiens 0.00002 55

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