| Transcript ID | Brain |
|---|---|
| ENST00000374708 | 0.194±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | collagen, type XI, alpha 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374708  |
COL11A2-001 |
ENSG00000204248 |
9606 | - |
6:33162681-33192499  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001PH | CIL_0001PH_0002 | CGP | 6:33162681-33200688 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001503 | IEA | ossification |
| GO:0001894 | IEA | tissue homeostasis |
| GO:0002062 | IEA | chondrocyte differentiation |
| GO:0005201 | IEA | extracellular matrix structural constituent |
| GO:0005581 | IEA | collagen trimer |
| GO:0005592 | IEA | collagen type XI trimer |
| GO:0005840 | IEA | ribosome |
| GO:0007605 | IEA | sensory perception of sound |
| GO:0030199 | IEA | collagen fibril organization |
| GO:0048705 | IEA | skeletal system morphogenesis |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000087497
|
Col11a2-001 | protein_coding | Mus_musculus | 0 | 6030 |
|
ENSMUST00000114252
|
Col11a2-201 | protein_coding | Mus_musculus | 0 | 5153 |
|
ENSMUST00000114255
|
Col11a2-202 | protein_coding | Mus_musculus | 0 | 5151 |
|
ENSMUST00000143354
|
Col11a2-003 | protein_coding | Mus_musculus | 0 | 2953 |
|
ENSMUST00000144927
|
Col11a2-006 | retained_intron | Mus_musculus | 0 | 965 |
|
ENSMUST00000131134
|
Col11a2-002 | protein_coding | Mus_musculus | 0 | 942 |
|
ENSMUST00000173749
|
Col11a2-007 | processed_transcript | Mus_musculus | 0 | 531 |
|
ENSMUST00000137374
|
Col11a2-005 | retained_intron | Mus_musculus | 0 | 267 |
