C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-3 family cell polarity regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374794 PARD3-005 ENSG00000148498 9606 - 10:34109561-34815321 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungMuscleOvaryPlacentaTestisENST00000374794
Transcript ID Adipose Breast Colon Lung Muscle Ovary Placenta Testis
ENST00000374794 1.088±0.00 2.325±0.00 4.470±0.00 2.630±0.00 6.057±0.00 5.912±0.00 5.420±0.00 4.307±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005547 ISS phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005911 ISS cell-cell junction
GO:0005923 ISS tight junction
GO:0006461 TAS protein complex assembly
GO:0006612 ISS protein targeting to membrane
GO:0007049 IEA cell cycle
GO:0007163 TAS establishment or maintenance of cell polarity
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007205 TAS protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007409 TAS axonogenesis
GO:0008356 TAS asymmetric cell division
GO:0010801 ISS negative regulation of peptidyl-threonine phosphorylation
GO:0022011 ISS myelination in peripheral nervous system
GO:0030054 IDA cell junction
GO:0031643 ISS positive regulation of myelination
GO:0032266 ISS phosphatidylinositol-3-phosphate binding
GO:0033269 ISS internode region of axon
GO:0034329 TAS cell junction assembly
GO:0045216 TAS cell-cell junction organization
GO:0070830 ISS tight junction assembly
GO:0090162 ISS establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159537 Pard3-012 protein_coding Mus_musculus 0 2457
ENSMUST00000160766 Pard3-014 protein_coding Mus_musculus 0 2337
ENSMUST00000161277 Pard3-013 protein_coding Mus_musculus 0 2261
ENSMUST00000162536 Pard3-018 protein_coding Mus_musculus 0 1615
ENSMUST00000160581 Pard3-017 protein_coding Mus_musculus 0 1559
ENSMUST00000162531 Pard3-016 protein_coding Mus_musculus 0 1559
ENSMUST00000026921 Pard3-006 protein_coding Mus_musculus 0 1332
ENSMUST00000160593 Pard3-005 retained_intron Mus_musculus 0 900
ENSMUST00000079777 Pard3-201 protein_coding Mus_musculus 0 896
ENSMUST00000162456 Pard3-007 protein_coding Mus_musculus 0 896
ENSMUST00000160272 Pard3-002 protein_coding Mus_musculus 0 896
ENSMUST00000162309 Pard3-001 protein_coding Mus_musculus 0 893
ENSMUST00000108752 Pard3-202 protein_coding Mus_musculus 0 880
ENSMUST00000161355 Pard3-019 protein_coding Mus_musculus 0 880
ENSMUST00000162602 Pard3-015 protein_coding Mus_musculus 0 880
ENSMUST00000162665 Pard3-008 protein_coding Mus_musculus 0 880
ENSMUST00000160717 Pard3-004 protein_coding Mus_musculus 0 880
ENSMUST00000162907 Pard3-003 protein_coding Mus_musculus 0 880
ENSMUST00000163002 Pard3-024 retained_intron Mus_musculus 0 438
ENSMUST00000161348 Pard3-009 protein_coding Mus_musculus 0 436
ENSMUST00000159818 Pard3-021 nonsense_mediated_decay Mus_musculus 0 331
ENSMUST00000159141 Pard3-020 nonsense_mediated_decay Mus_musculus 0 228
ENSMUST00000162035 Pard3-010 retained_intron Mus_musculus 0 213

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