C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-3 family cell polarity regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160272 Pard3-002 ENSMUSG00000025812 10090 + 8:127064056-127612286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMusclePlacentaTestisENSMUST00000160272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000160272 1.764±0.64 3.240±0.00 2.921±0.82 3.832±1.00 1.119±0.20 2.179±0.00 1.402±0.32 2.773±0.47 1.428±0.64 1.611±0.28 3.776±0.90 0.254±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CM CIL_0000CM_0002 CGP 8:127063893-128505462

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0003383 IGI apical constriction
GO:0005080 IPI protein kinase C binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0005911 IDA cell-cell junction
GO:0005912 IDA adherens junction
GO:0005913 IDA cell-cell adherens junction
GO:0005938 IDA cell cortex
GO:0016337 IC single organismal cell-cell adhesion
GO:0030054 IDA cell junction
GO:0032970 IGI regulation of actin filament-based process
GO:0043234 IDA protein complex
GO:0044319 IMP wound healing, spreading of cells
GO:0045177 IDA apical part of cell
GO:0051642 IMP centrosome localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340077 PARD3-201 protein_coding Homo_sapiens 0 3229
ENST00000346874 PARD3-004 protein_coding Homo_sapiens 0 3186
ENST00000350537 PARD3-006 protein_coding Homo_sapiens 0 1770
ENST00000374773 PARD3-009 protein_coding Homo_sapiens 0 2547
ENST00000374776 PARD3-001 protein_coding Homo_sapiens 0 1770
ENST00000374788 PARD3-003 protein_coding Homo_sapiens 0 4034
ENST00000374789 PARD3-002 protein_coding Homo_sapiens 0 3993
ENST00000374790 PARD3-010 protein_coding Homo_sapiens 0 2217
ENST00000374794 PARD3-005 protein_coding Homo_sapiens 0 896
ENST00000466092 PARD3-008 processed_transcript Homo_sapiens 0 765
ENST00000544292 PARD3-202 protein_coding Homo_sapiens 0 1393
ENST00000545260 PARD3-203 protein_coding Homo_sapiens 0 1323
ENST00000545693 PARD3-204 protein_coding Homo_sapiens 0 2217

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