C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Fanconi anemia, complementation group C | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000375305  |
FANCC-002 |
ENSG00000158169 |
9606 | - |
9:95099055-95317225  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002J5 | CIL_0002J5_0001 | CGP | 9:94726701-95317709 |
| CIL_0002J8 | CIL_0002J8_0001 | CGP | 9:95099054-95517057 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | TAS | nucleus |
| GO:0005654 | TAS | nucleoplasm |
| GO:0005737 | TAS | cytoplasm |
| GO:0005829 | IDA | cytosol |
| GO:0006281 | TAS:IEA | DNA repair |
| GO:0006461 | TAS | protein complex assembly |
| GO:0043240 | IDA | Fanconi anaemia nuclear complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000161977
|
Fancc-003 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000073029
|
Fancc-001 | protein_coding | Mus_musculus | 0 | 1068 |
|
ENSMUST00000163091
|
Fancc-002 | protein_coding | Mus_musculus | 0 | 1037 |
|
ENSMUST00000099444
|
Fancc-006 | protein_coding | Mus_musculus | 0 | 935 |
|
ENSMUST00000160151
|
Fancc-005 | retained_intron | Mus_musculus | 0 | 800 |
|
ENSMUST00000160333
|
Fancc-004 | retained_intron | Mus_musculus | 0 | 756 |
|
ENSMUST00000162971
|
Fancc-008 | protein_coding | Mus_musculus | 0 | 610 |
|
ENSMUST00000162375
|
Fancc-010 | protein_coding | Mus_musculus | 0 | 580 |
|
ENSMUST00000159024
|
Fancc-017 | protein_coding | Mus_musculus | 0 | 549 |
