C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Fanconi anemia, complementation group C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159024 Fancc-017 ENSMUSG00000021461 10090 - 13:63347512-63497278 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J6 CIL_0002J6_0002 CGP 13:62864753-63326096
CIL_0002J5 CIL_0002J5_0002 CGP 13:63014934-63497278
CIL_00086R CIL_00086R_0002 VISTA 13:63254160-63855734
CIL_0008KR CIL_0008KR_0002 VISTA 13:63268917-63869745
CIL_0002J8 CIL_0002J8_0002 CGP 13:63304709-63565520

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002262 IGI myeloid cell homeostasis
GO:0006289 IMP nucleotide-excision repair
GO:0007276 IMP gamete generation
GO:0007281 IMP germ cell development
GO:0019430 IGI removal of superoxide radicals

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289081 FANCC-001 protein_coding Homo_sapiens 0 549
ENST00000375305 FANCC-002 protein_coding Homo_sapiens 0 549
ENST00000433829 FANCC-004 protein_coding Homo_sapiens 0 422
ENST00000474949 FANCC-005 processed_transcript Homo_sapiens 0 346
ENST00000490972 FANCC-201 protein_coding Homo_sapiens 0 549

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