C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | predicted gene 21969 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000178644  |
Gm21969-001 |
ENSMUSG00000094439 |
10090 | + |
4:139603186-139662691  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003WQ | CIL_0003WQ_0002 | CGP | 4:139352609-139620382 |
| CIL_0008CW | CIL_0008CW_0002 | VISTA | 4:139530774-140132378 |
| CIL_0002WB | CIL_0002WB_0003 | CGP | 4:139603186-139662691 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005882 | IEA | intermediate filament |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000290597
|
ALDH4A1-002 | protein_coding | Homo_sapiens | 0 | 1291 |
|
ENST00000336604
|
IFFO1-001 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000355609
|
IFFO2-003 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000356896
|
IFFO1-011 | protein_coding | Homo_sapiens | 0 | 255 |
|
ENST00000375341
|
ALDH4A1-001 | protein_coding | Homo_sapiens | 0 | 1291 |
|
ENST00000396830
|
IFFO1-010 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000396840
|
IFFO1-008 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000416166
|
IFFO2-002 | protein_coding | Homo_sapiens | 0 | 832 |
|
ENST00000436152
|
IFFO1-201 | protein_coding | Homo_sapiens | 0 | 255 |
|
ENST00000455833
|
IFFO2-001 | protein_coding | Homo_sapiens | 0 | 1280 |
|
ENST00000465801
|
IFFO1-003 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000471408
|
IFFO1-004 | retained_intron | Homo_sapiens | 0 | 265 |
|
ENST00000472558
|
IFFO1-005 | retained_intron | Homo_sapiens | 0 | 265 |
|
ENST00000487279
|
IFFO1-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 255 |
|
ENST00000488007
|
IFFO1-006 | retained_intron | Homo_sapiens | 0 | 196 |
|
ENST00000494072
|
RP13-279N23.2-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 3668 |
|
ENST00000538309
|
ALDH4A1-005 | protein_coding | Homo_sapiens | 0 | 1291 |
|
ENST00000538839
|
ALDH4A1-201 | protein_coding | Homo_sapiens | 0 | 902 |
|
ENST00000615885
|
IFFO1-202 | protein_coding | Homo_sapiens | 0 | 255 |
|
ENST00000619571
|
IFFO1-203 | protein_coding | Homo_sapiens | 0 | 255 |
