C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375375 PAX7-001 ENSG00000009709 9606 + 1:18631006-18736138 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Z CIL_00098Z_0001 VISTA 1:18089892-18691429
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000983 IEA RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006338 IEA chromatin remodeling
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007519 IEA skeletal muscle tissue development
GO:0009653 TAS anatomical structure morphogenesis
GO:0010453 IEA regulation of cell fate commitment
GO:0010468 IEA regulation of gene expression
GO:0014813 IEA skeletal muscle satellite cell commitment
GO:0021527 IEA spinal cord association neuron differentiation
GO:0021904 IEA dorsal/ventral neural tube patterning
GO:0031062 IEA positive regulation of histone methylation
GO:0043066 TAS negative regulation of apoptotic process
GO:0043393 IEA regulation of protein binding
GO:0043403 IEA skeletal muscle tissue regeneration
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048663 IEA neuron fate commitment
GO:0048706 IEA embryonic skeletal system development
GO:0051216 IEA cartilage development
GO:0060415 IEA muscle tissue morphogenesis
GO:2000288 IEA positive regulation of myoblast proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030508 Pax7-001 protein_coding Mus_musculus 0 1910
ENSMUST00000174681 Pax7-002 protein_coding Mus_musculus 0 1882
ENSMUST00000004994 Pax3-002 protein_coding Mus_musculus 0 566
ENSMUST00000087086 Pax3-001 protein_coding Mus_musculus 0 564
ENSMUST00000172555 Pax3-003 processed_transcript Mus_musculus 0 381

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